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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33034108_33036430_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33034108 - 33036430

Intron Length:

2323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TTCTTCTTCACA

Flanking Amino Acid:

AKDQGINRALGALPDKGDLF

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

0.72

38.9

Major PPT

87.5

0.84

0.7

83.3

25.2

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

68.4

0.57

1.7

78.35

38.8

Associated Gene:

Gene:

C11orf49

Ensembl Gene ID:

ENSAPLG00000009411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009807

33024132 - 33037149

13018