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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33036495_33036968_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33036495 - 33036968

Intron Length:

474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTGGA

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGACAA

U12 Branch Point Sequence:

CTACCCAGCATT

Flanking Amino Acid:

DPAMDQELEKLIAQVSGLAI

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

67.1

38.3

Major BPS

46.3

-0.2

1.3

52.7

43.2

Major PPT

92.3

0.95

0.6

85.1

29.7

Minor 5ss

34.6

-1.7

3.3

43.6

Minor BPS

42.4

-0.5

2.1

60.27

Associated Gene:

Gene:

C11orf49

Ensembl Gene ID:

ENSAPLG00000009411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009807

33024132 - 33037149

13018