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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33040400_33040519_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33040400 - 33040519

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTTAG

5'SS Class:

major

3'SS Sequence:

CTGGTTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTTAC

U12 Branch Point Sequence:

CCAGCCTTACTC

Flanking Amino Acid:

LFGEAENAHSGGVSIGNVLP

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

68.7

38.4

Major BPS

51.2

0.03

1.2

45.3

39.5

Major PPT

74.9

0.56

0.9

69.6

36.8

Minor 5ss

-0.9

2.5

49.5

46.8

Minor BPS

49.3

-0

1.8

54.12

44.5

Associated Gene:

Gene:

ARFGAP2

Ensembl Gene ID:

ENSAPLG00000008452

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008849

33039806 - 33047713

7908