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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33058524_33060121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33058524 - 33060121

Intron Length:

1598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGAAG

5'SS Class:

major

3'SS Sequence:

TTTTTGGTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TGCTTCCTAATA

Flanking Amino Acid:

QEADELSFKAGEELMKISEE

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

63.1

42.9

Major BPS

81.9

0.79

0.9

80.1

Major PPT

81.6

0.71

0.9

77.2

37.1

Minor 5ss

29.9

-2.3

3.3

38.8

46.5

Minor BPS

59.2

0.28

1.7

68.19

38.5

Associated Gene:

Gene:

PACSIN3

Ensembl Gene ID:

ENSAPLG00000007958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008312

33058408 - 33065715

7308