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Intron Name: Anas_platyrhynchos_platyrhynchos_5_3308971_3312012_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3308971 - 3312012

Intron Length:

3042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

TACATCCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TGGCTCTTACAT

Flanking Amino Acid:

QCASEIIQGNGIQLLMEMLF

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

85.3

31.1

Major BPS

79.2

0.73

75.3

39.4

Major PPT

71.7

0.49

0.9

62.6

39.2

Minor 5ss

47.9

-0.2

2.5

65.4

40.1

Minor BPS

49.9

0.07

1.7

67.07

43.3

Associated Gene:

Gene:

INSC

Ensembl Gene ID:

ENSAPLG00000008621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044544

3219978 - 3315218

95241

ENSAPLT00000018703

3216491 - 3315142

98652

ENSAPLT00000008966

3215995 - 3315142

99148