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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33095306_33095403_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
33095306 - 33095403

Intron Length:
98

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCG|GTAAGGGCA

5'SS Class:
strong_major

3'SS Sequence:
CTTGGACCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTCAC

U12 Branch Point Sequence:
TCTCCTTGGACC

Flanking Amino Acid:
RHRACQLRVLRLGSCHLTGS

Intron Amino Acid Position:
802

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80
0.71
1
67.1
38.4

Major BPS
72.4
0.56
1
73.5
32.5

Major PPT
71.1
0.48
0.9
62.8
38.7

Minor 5ss
30
-2.3
3.5
39.6
45.9

Minor BPS
58.5
0.25
1.5
67.85
37.9

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33094818 - 33098917
4100