Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_33157804_33158467_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33157804 - 33158467

Intron Length:

664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGCTCT

5'SS Class:

major

3'SS Sequence:

TCTTGTTCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTAATAAAA

Flanking Amino Acid:

PGRVSTEVDARLSFDKEGMI

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.2

66.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.7

0.44

70.5

34.1

Minor 5ss

48.9

-0.1

2.4

66.5

44.5

Minor BPS

54.2

0.13

1.9

74.84

35.7

Associated Gene:

Gene:

TALDO1

Ensembl Gene ID:

ENSAPLG00000010471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010921

33154903 - 33161953

7051