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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33176454_33176650_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
33176454 - 33176650

Intron Length:
197

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGGACA

5'SS Class:
strong_major

3'SS Sequence:
CTTCATGTCCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCTTCAT

U12 Branch Point Sequence:
TATTCCCCATGT

Flanking Amino Acid:
DSLGETWTKSRAEWPREANI

Intron Amino Acid Position:
335

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.5
0.86
0.8
77.5
32.3

Major BPS
69.6
0.49
1.3
73.6
41.8

Major PPT
69.3
0.43
0.9
61.3
39.7

Minor 5ss
27.1
-2.6
2.9
31.6
42.4

Minor BPS
45.1
-0.2
2.3
70.46
45.8

Associated Gene:

Gene:
EPS8L2

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33176108 - 33185936
9829