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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33185_35817_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33185 - 35817

Intron Length:

2633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTAATCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TTCTGTTTAATC

Flanking Amino Acid:

AATVRFNETLRDAVQLNVLS

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.04

0.7

89.2

17.6

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

69.5

0.44

63.5

41.8

Minor 5ss

38.3

-1.3

2.9

47.2

Minor BPS

64.8

0.44

1.7

73.34

38.7

Associated Gene:

Gene:

FAR1

Ensembl Gene ID:

ENSAPLG00000005107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037805

6668 - 51974

45307

ENSAPLT00000005315

16966 - 51974

35009