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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33238861_33239947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33238861 - 33239947

Intron Length:

1087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGGGCG

5'SS Class:

major

3'SS Sequence:

GTTTATGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TCTGGTTTATGT

Flanking Amino Acid:

PSADEAAAFAEVTTVTVANV

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.3

63.5

39.8

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

80.5

0.69

77.1

41.6

Minor 5ss

-2.9

3.2

30.4

42.9

Minor BPS

43.5

-0.4

2.3

62.39

48.2

Associated Gene:

Gene:

DEAF1

Ensembl Gene ID:

ENSAPLG00000011215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042873

33238785 - 33262454

23670

ENSAPLT00000028000

33238563 - 33261607

23045