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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33241601_33242449_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33241601 - 33242449

Intron Length:

849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATG

5'SS Class:

strong_major

3'SS Sequence:

TAATTTAATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCTAATTTAATT

Flanking Amino Acid:

GILYKNRLGSGGRGRCIKQG

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.9

36.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

73.9

0.54

71.6

42.6

Minor 5ss

36.4

-1.5

3.1

48.5

47.2

Minor BPS

63.7

0.51

1.5

77.3

39.6

Associated Gene:

Gene:

DEAF1

Ensembl Gene ID:

ENSAPLG00000011215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042873

33238785 - 33262454

23670

ENSAPLT00000028000

33238563 - 33261607

23045

ENSAPLT00000025257

33237886 - 33255738

17853

ENSAPLT00000011712

33239983 - 33261607

21625