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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33259889_33262259_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

33259889 - 33262259

Intron Length:

2371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAAGAT

5'SS Class:

major

3'SS Sequence:

AGTGCGTGAGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

AGCACTTCAATG

Flanking Amino Acid:

NYCSTFCQRKVWLSGVGAVT

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

70.1

33.8

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

0.09

1.1

47.6

44.3

Minor 5ss

37.5

-1.4

3.5

55.2

Minor BPS

47.6

-0.3

1.6

47.36

40.1

Associated Gene:

Gene:

DEAF1

Ensembl Gene ID:

ENSAPLG00000011215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042873

33238785 - 33262454

23670