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Intron Name: Anas_platyrhynchos_platyrhynchos_5_3327493_3341067_F

Intron Information:

Intron Rank:

129597

Intron Class:

major

Intron Phase:

Intron Coordinates:

3327493 - 3341067

Intron Length:

13575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATGGAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.2

87.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.9

0.47

0.9

41.2

Minor 5ss

34.7

-1.7

2.7

42.8

Minor BPS

46.6

-0.2

67.06

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048366

3325188 - 3341959

16772