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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33307608_33307948_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

33307608 - 33307948

Intron Length:

341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCGCTGCC

5'SS Class:

weak_major

3'SS Sequence:

GCTCTCAATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

TTGCTCTCAATG

Flanking Amino Acid:

AAPRGLPPAGEFKGEAVMSQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.5

61.2

39.2

Major BPS

73.1

0.57

71.9

31.3

Major PPT

69.5

0.44

62.9

37.3

Minor 5ss

33.5

-1.9

3.3

45.1

Minor BPS

55.5

0.03

1.6

60.6

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040100

33306488 - 33331322

24835

ENSAPLT00000035671

33306488 - 33331322

24835