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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33315299_33316726_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33315299 - 33316726

Intron Length:

1428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTCC

5'SS Class:

major

3'SS Sequence:

TTTGTTCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTCCAT

U12 Branch Point Sequence:

AGAACCAAAATA

Flanking Amino Acid:

DKQQQQSCEQPTEITKPLPS

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

37.3

Major BPS

68.5

0.46

1.2

78.5

35.1

Major PPT

86.6

0.82

0.7

80.9

31.3

Minor 5ss

44.2

-0.6

44.7

Minor BPS

45.2

-0.3

1.9

53.52

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035671

33306488 - 33331322

24835

ENSAPLT00000026705

33307912 - 33356002

48091

ENSAPLT00000004402

33307912 - 33331322

23411

ENSAPLT00000040100

33306488 - 33331322

24835

ENSAPLT00000036594

33307912 - 33357431

49520