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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33316825_33317102_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33316825 - 33317102

Intron Length:

278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAAG

5'SS Class:

strong_major

3'SS Sequence:

ATCTTGTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

ATCTTGTTTACA

Flanking Amino Acid:

ELGVREPRLESEYQPSEDIK

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.5

37.1

Major BPS

65.3

0.38

71.6

30.1

Major PPT

82.4

0.73

0.9

37.4

Minor 5ss

32.9

-2

2.9

45.6

Minor BPS

48.3

-0.1

2.3

64.61

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036594

33307912 - 33357431

49520

ENSAPLT00000035671

33306488 - 33331322

24835

ENSAPLT00000026705

33307912 - 33356002

48091

ENSAPLT00000004402

33307912 - 33331322

23411

ENSAPLT00000040100

33306488 - 33331322

24835