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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33323604_33323778_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33323604 - 33323778

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

ACTTTCATAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ACTTTCATAACA

Flanking Amino Acid:

VMEFEKDIKLGDETYSIKWE

Intron Amino Acid Position:

834

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.9

90.9

28.7

Major BPS

87.6

0.93

0.9

89.3

Major PPT

72.4

0.5

67.1

37.3

Minor 5ss

40.3

-1.1

3.2

59.2

45.4

Minor BPS

66.1

0.5

1.6

74.29

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004402

33307912 - 33331322

23411

ENSAPLT00000040100

33306488 - 33331322

24835

ENSAPLT00000036594

33307912 - 33357431

49520

ENSAPLT00000035671

33306488 - 33331322

24835

ENSAPLT00000026705

33307912 - 33356002

48091