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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33356701_33359779_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

33356701 - 33359779

Intron Length:

3079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGATCT

5'SS Class:

major

3'SS Sequence:

CTAATCTTGGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTATTCTAATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

69.2

36.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

65.2

0.34

39.5

Minor 5ss

42.8

-0.8

3.1

63.5

41.4

Minor BPS

58.7

0.35

1.9

80.16

41.9

Associated Gene:

Gene:

PAK6

Ensembl Gene ID:

ENSAPLG00000003937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004057

33355862 - 33383221

27360