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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33356701_33367329_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

33356701 - 33367329

Intron Length:

10629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGATCT

5'SS Class:

major

3'SS Sequence:

ATCTCTGATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAA

U12 Branch Point Sequence:

CCATCTCTGATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

69.2

36.2

Major BPS

70.6

0.51

73.3

31.3

Major PPT

72.6

0.51

Minor 5ss

42.8

-0.8

3.1

63.5

41.4

Minor BPS

49.5

0.04

1.7

63.66

41.5

Associated Gene:

Gene:

PAK6

Ensembl Gene ID:

ENSAPLG00000003937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039158

33355862 - 33383221

27360