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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33367539_33372029_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33367539 - 33372029

Intron Length:

4491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

AAATCTCTGACT

Flanking Amino Acid:

ITRMQLQPMKTVVRGSTVEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

77.3

0.61

0.9

71.5

38.3

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

56.6

0.29

1.6

71.94

38.5

Associated Gene:

Gene:

PAK6

Ensembl Gene ID:

ENSAPLG00000003937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039158

33355862 - 33383221

27360

ENSAPLT00000004057

33355862 - 33383221

27360