Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_33372648_33375771_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33372648 - 33375771

Intron Length:

3124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTTA

5'SS Class:

major

3'SS Sequence:

GTTCTTCCCAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCTGCTTTCATA

Flanking Amino Acid:

NKSGPSLHIKPNAFFRPQQW

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

69.2

Major BPS

87.6

0.93

0.9

89.3

Major PPT

67.2

0.39

67.4

Minor 5ss

38.6

-1.3

3.6

55.4

48.8

Minor BPS

54.1

0.12

1.8

66.01

41.8

Associated Gene:

Gene:

PAK6

Ensembl Gene ID:

ENSAPLG00000003937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039158

33355862 - 33383221

27360

ENSAPLT00000004057

33355862 - 33383221

27360