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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33380031_33380713_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33380031 - 33380713

Intron Length:

683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TTGGCTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

ATTGATGGAACA

Flanking Amino Acid:

VIARVPYTTEVDIWSLGIMV

Intron Amino Acid Position:

594

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

38.2

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

0.49

0.9

65.3

36.3

Minor 5ss

-2.2

3.3

45.6

Minor BPS

43.2

-0.5

2.2

59.28

40.6

Associated Gene:

Gene:

PAK6

Ensembl Gene ID:

ENSAPLG00000003937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039158

33355862 - 33383221

27360

ENSAPLT00000004057

33355862 - 33383221

27360