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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33380849_33382802_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33380849 - 33382802

Intron Length:

1954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCATA

5'SS Class:

major

3'SS Sequence:

TGCTTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

TCTTGCTGACTT

Flanking Amino Acid:

PPPKLKNFHRTSPVLRDFLD

Intron Amino Acid Position:

639

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

74.1

38.4

Major BPS

0.62

65.3

41.5

Major PPT

83.7

0.76

0.8

79.1

32.9

Minor 5ss

37.1

-1.5

40.3

45.6

Minor BPS

48.9

-0

2.1

72.16

45.3

Associated Gene:

Gene:

PAK6

Ensembl Gene ID:

ENSAPLG00000003937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039158

33355862 - 33383221

27360

ENSAPLT00000004057

33355862 - 33383221

27360