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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33394505_33395155_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33394505 - 33395155

Intron Length:

651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTTCTCTTAAAG

Flanking Amino Acid:

IQEVVQTIKLVIEKTARYQR

Intron Amino Acid Position:

1065

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

29.3

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

81.5

0.71

0.9

82.7

26.4

Minor 5ss

-0.8

2.8

56.6

41.9

Minor BPS

70.4

0.5

1.4

74.05

37.7

Associated Gene:

Gene:

PLCB2

Ensembl Gene ID:

ENSAPLG00000002574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002672

33393491 - 33439123

45633