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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33396497_33399109_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33396497 - 33399109

Intron Length:

2613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCCGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAG

U12 Branch Point Sequence:

CTGTCTCTCACA

Flanking Amino Acid:

ELKALKESSESNIKDIKKKL

Intron Amino Acid Position:

1013

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

86.5

23.8

Major BPS

63.9

0.35

1.6

72.3

40.4

Major PPT

85.2

0.79

0.7

24.1

Minor 5ss

43.1

-0.8

2.9

58.1

46.5

Minor BPS

48.5

-0.1

2.1

63.23

43.6

Associated Gene:

Gene:

PLCB2

Ensembl Gene ID:

ENSAPLG00000002574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002672

33393491 - 33439123

45633