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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33404701_33405120_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33404701 - 33405120

Intron Length:

420

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTTGATTTACCT

Flanking Amino Acid:

SVKLRDGSMERLDMQRNFPS

Intron Amino Acid Position:

810

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

0.85

0.9

39.9

Major PPT

78.8

0.65

0.9

77.3

36.4

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

57.5

0.31

1.9

80.33

41.9

Associated Gene:

Gene:

PLCB2

Ensembl Gene ID:

ENSAPLG00000002574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002672

33393491 - 33439123

45633