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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33406329_33406605_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33406329 - 33406605

Intron Length:

277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTTAC

U12 Branch Point Sequence:

GTCAGCTTACCT

Flanking Amino Acid:

RVIPIIAVHSGYHHVCLRSE

Intron Amino Acid Position:

746

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

90.3

22.3

Major BPS

57.6

0.19

1.1

49.1

37.7

Major PPT

0.9

0.7

88.2

29.1

Minor 5ss

45.5

-0.5

66.9

44.4

Minor BPS

49.1

0.01

2.1

69.13

47.3

Associated Gene:

Gene:

PLCB2

Ensembl Gene ID:

ENSAPLG00000002574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002672

33393491 - 33439123

45633