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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33407969_33408402_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33407969 - 33408402

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACG|GCAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

CAGTTGCTAATT

Flanking Amino Acid:

VVVASTLSVTILSGQFLSDR

Intron Amino Acid Position:

658

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

1.2

80.1

34.5

Major BPS

76.9

0.67

66.3

40.4

Major PPT

0.61

0.9

69.1

41.8

Minor 5ss

26.2

-2.7

3.6

35.6

40.5

Minor BPS

44.4

-0.3

2.3

60.73

43.6

Associated Gene:

Gene:

PLCB2

Ensembl Gene ID:

ENSAPLG00000002574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002672

33393491 - 33439123

45633