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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33416214_33416525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33416214 - 33416525

Intron Length:

312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAA

U12 Branch Point Sequence:

AATAGCTAAAGA

Flanking Amino Acid:

INSSHNTYLTAGQFSGISSP

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

68.4

36.4

Major BPS

61.3

0.28

1.1

61.7

34.1

Major PPT

79.5

0.66

0.8

73.5

31.5

Minor 5ss

35.6

-1.6

3.5

47.4

48.2

Minor BPS

43.6

-0.4

2.2

55.46

43.3

Associated Gene:

Gene:

PLCB2

Ensembl Gene ID:

ENSAPLG00000002574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002672

33393491 - 33439123

45633