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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33471124_33477617_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33471124 - 33477617

Intron Length:

6494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

TTTTCCTTCACA

Flanking Amino Acid:

GKDRLTGRARRWDAKEGEDM

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

70.2

40.4

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

88.4

0.86

0.6

83.8

24.4

Minor 5ss

32.2

-2

3.7

45.9

49.3

Minor BPS

81.8

0.99

1.6

91.36

30.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025107

33469910 - 33513685

43776

ENSAPLT00000021864

33469910 - 33513685

43776

ENSAPLT00000002573

33469910 - 33513685

43776