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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33517001_33524947_F

Intron Information:

Intron Rank:

145805

Intron Class:

major

Intron Phase:

Intron Coordinates:

33517001 - 33524947

Intron Length:

7947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

GGTCTAATACTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

26.4

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

84.6

0.78

0.7

80.6

31.5

Minor 5ss

32.1

-2

3.5

46.6

48.7

Minor BPS

39.6

-0.8

1.9

47.33

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037297

33516239 - 33525228

8990