Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_33539703_33540892_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33539703 - 33540892

Intron Length:

1190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GGCTGTTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

AGGATCTGACAC

Flanking Amino Acid:

QSMCQIEQDKIRSHVHFRDL

Intron Amino Acid Position:

527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

88.2

26.7

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

76.5

0.6

72.5

42.4

Minor 5ss

33.8

-1.9

2.6

42.8

44.1

Minor BPS

41.4

-0.6

1.7

44.25

36.8

Associated Gene:

Gene:

DISP2

Ensembl Gene ID:

ENSAPLG00000002430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002437

33525249 - 33544312

19064