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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33562130_33563188_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33562130 - 33563188

Intron Length:

1059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTA

5'SS Class:

strong_major

3'SS Sequence:

GGCTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCAGTTTTAATG

Flanking Amino Acid:

QGITAFIVEKGTPGFSTAQK

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

84.1

30.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.9

0.72

0.9

76.2

37.8

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

55.3

0.03

1.5

54.64

41.7

Associated Gene:

Gene:

IVD

Ensembl Gene ID:

ENSAPLG00000001128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001186

33554322 - 33568391

14070