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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33613188_33617204_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

33613188 - 33617204

Intron Length:

4017

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCGTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

ATTAACAGATGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

75.3

40.8

Major BPS

81.9

0.79

0.8

81.9

Major PPT

82.1

0.72

0.8

31.9

Minor 5ss

34.5

-1.8

2.8

42.1

44.5

Minor BPS

37.8

-0.8

2.1

58.5

43.6

Associated Gene:

Gene:

BAHD1

Ensembl Gene ID:

ENSAPLG00000000752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039100

33612255 - 33629542

17288