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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33618858_33621726_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33618858 - 33621726

Intron Length:

2869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTCTCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAGAT

U12 Branch Point Sequence:

TTTTCCTTCCCT

Flanking Amino Acid:

SYPYKMPFAAEGCKSLDQLN

Intron Amino Acid Position:

603

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

73.9

Major BPS

74.1

0.6

38.9

Major PPT

76.1

0.59

0.7

71.7

26.5

Minor 5ss

37.1

-1.5

3.3

50.2

46.4

Minor BPS

49.9

0.08

3.7

91.67

38.1

Associated Gene:

Gene:

BAHD1

Ensembl Gene ID:

ENSAPLG00000000752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039100

33612255 - 33629542

17288

ENSAPLT00000000902

33591900 - 33624978

33079