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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33622089_33623676_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

33622089 - 33623676

Intron Length:

1588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTGTC

5'SS Class:

major

3'SS Sequence:

GCCAATGCTGTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCCAAT

U12 Branch Point Sequence:

TGTGTGCCAATG

Flanking Amino Acid:

TACEKAVYVVNEPEPAVRKS

Intron Amino Acid Position:

724

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

73.5

Major BPS

56.7

0.17

1.4

64.7

Major PPT

58.1

0.18

50.2

38.9

Minor 5ss

-1.6

3.6

48.3

42.5

Minor BPS

-1.1

2.3

44.24

42.1

Associated Gene:

Gene:

BAHD1

Ensembl Gene ID:

ENSAPLG00000000752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039100

33612255 - 33629542

17288

ENSAPLT00000000902

33591900 - 33624978

33079