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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33636784_33638329_F

Intron Information:

Intron Rank:

139706

Intron Class:

major

Intron Phase:

Intron Coordinates:

33636784 - 33638329

Intron Length:

1546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCCGCTACCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATGAA

U12 Branch Point Sequence:

TTTCCCGCTACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

76.9

33.7

Major BPS

51.5

0.04

1.2

43.5

39.2

Major PPT

65.9

0.36

0.9

57.3

37.7

Minor 5ss

32.3

-2

2.9

32.2

42.1

Minor BPS

46.4

-0.3

2.5

68.91

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045111

33636652 - 33642478

5827