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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33699229_33699536_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

33699229 - 33699536

Intron Length:

308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAACACT

5'SS Class:

major

3'SS Sequence:

TTCTTTGCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACGCAT

U12 Branch Point Sequence:

ATGACAGTAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

41.6

Major BPS

53.4

0.08

1.3

63.4

35.6

Major PPT

81.6

0.71

0.8

80.5

31.5

Minor 5ss

41.9

-0.9

59.4

44.8

Minor BPS

47.4

-0.2

2.3

62.86

42.2

Associated Gene:

Gene:

RPUSD2

Ensembl Gene ID:

ENSAPLG00000004723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004855

33698743 - 33702637

3895

Gene:

Ensembl Gene ID:

ENSAPLG00000004765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004942

33694944 - 33699549

4606