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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33701071_33701845_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33701071 - 33701845

Intron Length:

775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCCCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

TCTTCTGAGAGT

Flanking Amino Acid:

RIDEQVRERQLEKEYVCRVV

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

78.2

0.64

0.7

73.6

24.8

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

42.9

-0.4

2.5

65.81

45.8

Associated Gene:

Gene:

RPUSD2

Ensembl Gene ID:

ENSAPLG00000004723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004855

33698743 - 33702637

3895