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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33708220_33708663_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

33708220 - 33708663

Intron Length:

444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATATCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GTTTTTTTGATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

87.9

0.85

0.8

85.7

33.4

Minor 5ss

39.3

-1.2

52.1

44.5

Minor BPS

71.4

0.76

1.1

82.67

32.4

Associated Gene:

Gene:

KNL1

Ensembl Gene ID:

ENSAPLG00000019252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047019

33708137 - 33735721

27585

ENSAPLT00000041578

33708137 - 33737273

29137