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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33711296_33711746_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33711296 - 33711746

Intron Length:

451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TATTTGTTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTAAAAACT

Flanking Amino Acid:

SRRVSFANTINCRVFQRDLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

81.6

33.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.6

0.64

0.8

77.4

36.6

Minor 5ss

45.5

-0.5

2.8

58.6

40.2

Minor BPS

50.9

0.11

2.2

81.75

39.5

Associated Gene:

Gene:

KNL1

Ensembl Gene ID:

ENSAPLG00000019252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047019

33708137 - 33735721

27585

ENSAPLT00000043186

33708664 - 33735721

27058

ENSAPLT00000041578

33708137 - 33737273

29137