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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33726332_33727156_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33726332 - 33727156

Intron Length:

825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

TCCTGTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TTCTTTCAATTC

Flanking Amino Acid:

DCQVLSQMIDELKQYVSVQD

Intron Amino Acid Position:

2007

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

75.5

40.6

Major BPS

76.9

0.67

1.2

31.9

Major PPT

78.9

0.65

0.9

75.9

Minor 5ss

41.4

-1

3.1

55.9

42.3

Minor BPS

41.5

-0.6

53.34

39.6

Associated Gene:

Gene:

KNL1

Ensembl Gene ID:

ENSAPLG00000019252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047019

33708137 - 33735721

27585

ENSAPLT00000043186

33708664 - 33735721

27058

ENSAPLT00000041578

33708137 - 33737273

29137