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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33727248_33728904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33727248 - 33728904

Intron Length:

1657

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATATTG

5'SS Class:

strong_major

3'SS Sequence:

CTATTCATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTCTATTCATT

Flanking Amino Acid:

EVMRTCSDEELKSFGAELNK

Intron Amino Acid Position:

2038

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

74.4

36.8

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

0.67

0.9

74.1

Minor 5ss

41.6

-0.9

3.1

56.3

47.9

Minor BPS

51.6

0.13

78.06

38.5

Associated Gene:

Gene:

KNL1

Ensembl Gene ID:

ENSAPLG00000019252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043186

33708664 - 33735721

27058

ENSAPLT00000041578

33708137 - 33737273

29137

ENSAPLT00000047019

33708137 - 33735721

27585