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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33732811_33733146_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33732811 - 33733146

Intron Length:

336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTCCTTCTCA

Flanking Amino Acid:

ELTVVFGPPIDGDVFGENPS

Intron Amino Acid Position:

2214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.3

1.04

0.8

79.7

35.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

89.5

0.89

0.6

88.5

20.9

Minor 5ss

-1.9

3.2

43.9

Minor BPS

-0

3.6

83.19

37.9

Associated Gene:

Gene:

KNL1

Ensembl Gene ID:

ENSAPLG00000019252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047019

33708137 - 33735721

27585

ENSAPLT00000043186

33708664 - 33735721

27058

ENSAPLT00000041578

33708137 - 33737273

29137