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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33733480_33734038_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33733480 - 33734038

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTTC

5'SS Class:

strong_major

3'SS Sequence:

ATCTCATGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CTCTTCTGATCT

Flanking Amino Acid:

KCPTLQYLPQVLHDVSLVVS

Intron Amino Acid Position:

2274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

76.3

33.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

67.8

0.4

62.7

38.1

Minor 5ss

40.6

-1

3.4

58.3

46.6

Minor BPS

54.2

0.21

1.8

71.9

45.2

Associated Gene:

Gene:

KNL1

Ensembl Gene ID:

ENSAPLG00000019252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047019

33708137 - 33735721

27585

ENSAPLT00000043186

33708664 - 33735721

27058

ENSAPLT00000041578

33708137 - 33737273

29137