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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33734158_33735384_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33734158 - 33735384

Intron Length:

1227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTCACACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATTT

Flanking Amino Acid:

NLLKTDINDTNLKLLFSSST

Intron Amino Acid Position:

2313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

80.3

26.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.3

0.57

0.9

69.9

Minor 5ss

32.3

-2

2.7

33.9

Minor BPS

63.7

0.51

1.5

78.58

38.8

Associated Gene:

Gene:

KNL1

Ensembl Gene ID:

ENSAPLG00000019252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047019

33708137 - 33735721

27585

ENSAPLT00000043186

33708664 - 33735721

27058

ENSAPLT00000041578

33708137 - 33737273

29137