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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33735508_33735615_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33735508 - 33735615

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAT

U12 Branch Point Sequence:

TGCCCTCTAACA

Flanking Amino Acid:

FTVQKQIGNIGHEEISAVLS

Intron Amino Acid Position:

2354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

71.1

37.5

Major BPS

69.2

0.48

1.3

69.7

44.2

Major PPT

84.5

0.78

0.8

76.4

37.7

Minor 5ss

33.7

-1.9

2.8

31.8

42.6

Minor BPS

56.1

0.19

1.7

66.35

39.8

Associated Gene:

Gene:

KNL1

Ensembl Gene ID:

ENSAPLG00000019252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047019

33708137 - 33735721

27585

ENSAPLT00000043186

33708664 - 33735721

27058

ENSAPLT00000041578

33708137 - 33737273

29137