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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33744354_33746399_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33744354 - 33746399

Intron Length:

2046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTACT

5'SS Class:

major

3'SS Sequence:

TTGCTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAA

U12 Branch Point Sequence:

TGTTCGCGAAGT

Flanking Amino Acid:

RPERLLAVAERYGLSGSDVL

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.3

77.1

37.8

Major BPS

72.6

0.56

1.2

75.9

36.3

Major PPT

80.5

0.69

0.8

73.8

36.9

Minor 5ss

39.9

-1.1

2.5

52.8

43.8

Minor BPS

43.4

-0.4

2.6

70.51

45.7

Associated Gene:

Gene:

RAD51

Ensembl Gene ID:

ENSAPLG00000004452

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004596

33740598 - 33749709

9112