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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33796512_33797834_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33796512 - 33797834

Intron Length:

1323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

TGACCACTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

AATTTCTTACCT

Flanking Amino Acid:

TDEKKTYASDGKEELEIAFQ

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

80.4

33.7

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

70.5

0.46

62.7

38.4

Minor 5ss

34.1

-1.8

3.3

45.4

43.9

Minor BPS

69.9

0.7

1.6

83.19

37.7

Associated Gene:

Gene:

RMDN3

Ensembl Gene ID:

ENSAPLG00000003985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004106

33773881 - 33805163

31283

ENSAPLT00000045109

33768809 - 33805989

37181