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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33811724_33814089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33811724 - 33814089

Intron Length:

2366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CATTGCTCACTG

Flanking Amino Acid:

YLLVSTQIRMEVGPTMVGDE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

64.1

41.7

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

83.1

0.74

0.7

77.2

24.8

Minor 5ss

29.2

-2.4

2.7

30.6

36.2

Minor BPS

42.9

-0.6

2.2

48.19

45.6

Associated Gene:

Gene:

GCHFR

Ensembl Gene ID:

ENSAPLG00000025385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043954

33811688 - 33819692

8005